PhyloGenes 2.0 Genomes Stats

Owned by Peifen Zhang (Unlicensed)
Last updated: Mar 12, 2020

This page includes information for the 40 plant genomes included in PhyloGenes v2.0.

Detailed information about the reference genomes and proteins from PANTHER 15.0 that are included in PhyloGenes can be found at PANTHERDB.

To cite PANTHER, use this reference.


Scientific NamePhylogenes Displayed Name

Genome Version

UniProt
Reference
Version		Total ACTUAL number of protein coding genes (PCG)Total number of protein coding genes (PCG) in PANTHER families

% of Genes in PANTHER v15

Amborella trichopodaA. trichopodaAMTR1.02019_04272961720263%
Arabidopsis thalianaA. thalianaTAIR10.12019_04274162444389%
Brachypodium distachyonpurple false bromeBrachypodium_distachyon_v3.02019_04

34295

2645977%
Brassica napusrapeseedAST_PRJEB5043_v12019_046007245821

76%

Brassica rapa subsp. PekinensisChinese cabbageBrapa_1.02019_04407333559187%
Capsicum annuumpepperASM51225v22019_0434776

28476

82%
Chlamydomonas reinhardtiiC. reinhardtiiChlamydomonas_reinhardtii_v5.52019_04176141171266%
Citrus sinensisorangeCitrus_sinensis_v1.02019_04294702425482%
Cucumis sativuscucumberASM407v22019_04237101912581%
Erythranthe guttatayellow monkeyflowerMimgu1_02019_04273942473290%
Eucalyptus grandisflooded gumEgrandis1_02019_04365123027183%
Glycine maxsoybeanGlycine_max_v2.12019_04558654889088%
Gossypium hirsutumcottonASM98774v12019_04602975560492%
Helianthus annuussunflower HanXRQr1.02019_04510143913477%
Hordeum vulgarebarleyIBSC v22019_04355362768578%
Juglans regiawalnutwgs.5d2019_04356213282692%
Lactuca sativalettuceLsat_Salinas_v72019_04378062954178%
Manihot esculentacassavaManihot esculenta v62019_04328012795185%
Medicago truncatulabarrelcloverMedtrA17_4.02019_04496223333667%
Musa acuminatabananaASM31385v12019_04363582914680%
Nelumbo nuciferasacred lotusChinese Lotus 1.12019_04238622262095%
Nicotiana tabacumtobaccoNtab-TN902019_04612385398288%
Oryza sativariceIRGSP-1.02019_04438482731362%
Ostreococcus tauriO. tauri1406062019_047743572474%
Phoenix dactyliferadate palmDPv012019_04254852423095%
Physcomitrella patensP. patensPhypa V32019_04307861964764%
Populus trichocarpablack cottonwoodPop_tri_v32019_04425483460581%
Prunus persicapeachPrunus_persica_NCBIv22019_04266442323887%
Ricinus communiscastor beanJCVI_RCG_1.12019_04311082134369%
Selaginella moellendorffiiS. moellendorffiiv1.02019_04

33114

2626879%
Setaria italicafoxtail milletSetaria_italica_v2.02019_04339802801782%
Solanum lycopersicumtomatoSL3.02019_04346372541773%
Solanum tuberosumpotatoSolTub_3.02019_04387512589167%
Sorghum bicolorsorghumSorghum_bicolor_NCBIv32019_04337072666479%
Spinacia oleraceaspinachSpinach-1.0.32019_04216181762882%
Theobroma cacaococoaTheobroma_cacao_201108222019_04289542227077%
Triticum aestivumwheatiwgsc_refseqv1.02019_041028029244890%
Vitis viniferagrape12X2019_04298722394380%
Zea mayscornB73 RefGen_v42019_04394303408186%
Zostera marinaeelgrassZosma_marina.v.2.12019_04205291766886%