General Arabidopsis Database Resouces

Bio-Analytic Resource for Plant Biology (BAR)

ePlant tool allows for exploration of Arabidopsis data sets from the kilometre to nanometre scales. eFP Browser provides "gene expression anatograms" for depicting where and when a gene is expressed. Arabidopsis Interactions Viewer taps into the BAR's database of more than 100k protein-protein interactions and 2.8M protein-DNA interactions. Tools for exploring other plant data available too!

Provart Laboratory at the University of Toronto

Ensembl Plants

Great resource for processed RNA-seq data, precomputed gene trees across the species curated by Gramene, as an access point to Plant Reactome and other features.

EBI-EMBL

Gramene

Gramene is a curated, open-source, integrated data resource for comparative functional genomics in crops and model plant species.

Cold Spring Harbor Laboratory, Oregon State University, and EMBL-EBI.

The Arabidopsis Book

Freely accessible, peer reviewed articles about everything Arabidopsis. Written by experts and wide ranging in coverage, it is the definitive guide.

American Society for Plant Biology (ASPB)

The Arabidopsis Information Resource (TAIR)

An online community resource and database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. TAIR integrates information about the Arabidopsis genome, genes, gene products, natural variants, mutant alleles and plant phenotypes and research literature.

Phoenix Bioinformatics

UniProt

Curated protein database containing Arabidopsis reference proteome data as well as many other reference genomes.

UniProt Consortium