Metabolomics Resources

Metabolomics Resources



  • Resource Link

    Kyoto Encyclopedia of Genes and Genomes (KEGG)



    Description

    Database of pathways, reactions, compounds and gene function for Arabidopsis and many other organisms.

    Maintained by

    Kanehisa Laboratories



  • Resource Link

    Medicinal Plants Genomics Resource





    Description

    Medicinal plant genome databases, genome browsers and genome annotation for 12 species.

    Maintained by

    Buell Lab



  • Resource Link

    MetaboLights



    Description

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and concentrations, and experimental data from metabolic experiments. MetaboLights is the recommended Metabolomics repository for a number of leading journals. 

    Maintained by

    EBI-EMBL



  • Resource Link

    MetabolomeXchange



    Description

    Discovery environment for querying multiple metabolimic data repositories.

    Maintained by

    Thomas Hankemeier



  • Resource Link

    Plant Metabolic Network (PMN)



    Description

    PMN provides access to PlantCyc, a consolidated database of manually curated or reviewed information about shared and unique metabolic pathways present in over 350 plant species, as well as single species databases of manually curated and/or computationally predicted information about enzymes, pathways, and more.

    Maintained by

    Sue Rhee



  • Resource Link

    Plant/Eukaryotic and Microbial Systems Resource (PMR)



    Description

    Database with web-based visualization and analysis of processed metabolomics data and its metadata. Combined with transcriptomic and/or Mass Spec Imaging (MSI) data/metabolite imaging data from the same samples as the metabolomic data (as available).   

    Maintained by

    Eve Wurtele



  • Resource Link

    Platform for Riken Metabolomics (PRIMe)



    Description

    Metabolomic datasets, analytic software and a portal to related metabolomic datasets and resources.

    Maintained by

    RIKEN Center for Sustainable Resource Science