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The way JBrowse works within Apollo, the first time your load up a track it might take a while. But once loaded, any successive loads will be quicker.
I used to see tracks and now they are gone.
Close the track and open it again. Yes, this is the standard 'turn it off and turn it on again' solution.
What is the meaning of the lower case letters in the nucleotide sequence?
These indicate regions of low complexity. They have not no impact/implication with respect to annotation.
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Track name | Description of data |
Col-CC_Genomic_Annotations_Data | Result of NCBI Eukaryotic Annotation Pipeline |
Gnomon Models | one of the inputs into the NCBI Pipeline |
| Protein alignment | proteins from other species aligned to v12 protein sequences |
| TSA alignment | computationall computationally assembled transcripts from isoseq experiments aligned to v12 transcript sequences |
(AT-Col-CC-Liftoff-from-TAIR10.1) | (coming: v11 models mapped to v12 reference using Liftoff) |
| Col-CC Same Species | proteins from Arabidopsis aligned to v12 protein sequences |
| (RNA seq tracks) | (coming) |
| (long read seq tracks) | (coming) |
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