This page includes information for the 40 plant genomes included in PhyloGenes
...
v4.0.
Detailed information about the reference genomes and proteins from PANTHER 1617.0 that are included in PhyloGenes can be found at PANTHERDB.
To cite PANTHER, use this reference.
| Scientific Name | Phylogenes Displayed Name | Genome Version | UniProt
Reference
Version | Total ACTUAL number of protein coding genes (PCG) | Total number of protein coding genes (PCG) in PANTHER families | % of Genes in PANTHER |
|---|
v15v17
|
|---|
| Amborella trichopoda | A. trichopoda | AMTR1.0 |
202004273051705062%| 58% |
| Arabidopsis thaliana | A. thaliana | TAIR10.1 |
202004274622449420200426494202004600864619877%| 72% |
| Brassica rapa subsp. Pekinensis | Chinese cabbage |
CAASBrap_v301202004407373574588%202004349222911283%202004176141172967%202004278122304683%202004237181913981%| 77 |
| Erythranthe guttata | yellow monkeyflower | Mimgu1_0 |
202004273802466290%202004363433029183%202004558464893388%202004603045626593%2020043929577%| 72 |
Hordeum vulgare subsp. vulgare
| barley | IBSC v2 |
202004355572756378%2020_04 | 35604 | 33295 | 94%202004378192968178%85%2020_04 | 32767 | 27974 | 202004496343327067%| 65 |
Musa acuminata subsp. malaccensis
| banana |
ASM31385v1 | 2020_04 | 36365 | 29083 | 80%202004238702277595%202004612725477489%20200443659| Ostreococcus tauri | O. tauri | 140606 | 2020_04 | 7743 | 5715 | 74% |
| Phoenix dactylifera | date palm | DPv01 | 2020_04 | 25486 | 24320 | 95% |
27108 | 62% | | 24989 | 57 |
| Physcomitrella patens | P. patens | Phypa V3 |
202004308431960864%2020043465081%202004266422322787%202004311272131268%| 64 |
| Selaginella moellendorffii | S. moellendorffii | v1.0 |
202004331152647980%202004523353898574%74 |
| Solanum lycopersicum | tomato | SL3.0 |
202004346472569774%202004388102614567%202004336932675179%202004214791756682%202004289632239077%2020041028379388991%202004298732399680%87%B73 RefGen_v4 | 2020_04 | 39385 | 34071 | 202004203301752286%