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Users can now search in bulk and upload a list of AGI Locus identifiers. This feature can also be used as a starting point for bulk downloading of data (see Bulk Downloading Gene Data help or our YouTube Tutorial).
- Paste or upload a list of AGI identifiers (one ID per row)
- Apply any additional search parameters to the gene list or click submit
- On the results screen at the top will be a number of options for retrieving data for all or a subset of the results
- Get GO annotations- retrieve Gene Ontology annotations
- Get PO annotations-retrieve Plant Ontology annotations
- Get Sequences-retrieve FASTA formatted sequences
- Get Gene Descriptions- retrieves gene summaries and aliases
- Get Locus History- retrieves history of loci such as create date, merges , deletes etc.
- Get Microarray Elements- retrieves corresponding microarray element IDs
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Lets you search entities by their position on a particular map and is to be used with the Range parameters. Currently, you can search on only one map type at a time. The options are Reference Assembly (currently Araport11 which corresponds to the TAIR9 genome assembly), physical (BACs) and genetic maps.
Range
Lets you specify a range search by the upper and lower bounds. The value is interpreted based on the selected range units. You can specify the range by physical distance (kb).
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