This page gives information on where the data in TAIR come from, and what datasets are not yet in TAIR.
| Datasets in TAIR: | Sources |
|---|
| Plant Structure Ontology | Planteome |
| Cereon SNPs | Cereon Genomics |
| Classical genetic map | Meinke Lab Website |
| Clones | AtDB, GenBank, ABRC, user submissions |
| Community (people & organizations) | ABRC, AtDB, NASC, user submissions |
| Growth & Developmental Stages Ontologies | Planteome |
| DNA sequences | GenBank, AtDB, TIGR, IMA |
| Expression Data | AFGC, Websites, Literature, ATGenExpress, user submissions, NASCArrays |
| Gene Families | User submissions, Websites |
| Gene Ontology Controlled Vocabularies | Gene Ontology Consortium |
| Gene Ontology Functional Annotations | TAIR, Literature, UniProt |
| Gene Structure Annotations | TIGR, TAIR, user submissions |
| Genes | TIGR, GenBank, AtDB, Kazusa, Meinke Lab Website, Literature, user submissions |
| Images | ABRC, Literature, user submissions |
| Libraries | ABRC, GenBank |
| Markers (physical and genetic) | AtDB, NASC, user submissions |
| Metabolic pathways | MetaCyc, literature |
| Phenotypes | AtDB, ABRC, Literature |
| Physical maps | User submissions, Websites, Literature, AtDB |
| Polymorphisms | Stanford Genome Center, SALK, Arabidopsis Tilling Project, User submissions |
| Proteins | TIGR, TAIR |
| Protein subcellular localizations | Literature, Websites, user submissions |
| Protocols | User submissions |
| Publications | AtDB, PubMed, Agricola, Biosis |
| RI map | NASC, user submissions |
| Stocks | NASC, ABRC |
| Vectors | ABRC, GenBank |
| Datasets not in TAIR | Sources |
|---|
| Genetic interactions | Literature |
| Metabolic profiling | Literature |
| Physical interactions | Literature, Websites |
| Signal transduction pathways | Literature |
| Tryptic digest patterns | Websites |