This section provides information on the functional annotation of the Arabidopsis thaliana genome, ontologies used in the annotation effort, and sites for data retrieval.

Ontologies

Information about the ontologies available for describing biological data, with enphasis on those used at TAIR for describing genes.

TAIR Gene Search

Find Arabidopsis genes using Gene Ontology and Plant Ontology terms.

Search/Browse TAIR Keywords

A TAIR tool useful for searching all types of gene annotations done at TAIR, including gene ontology and plant ontology annotations.

TAIR GO Annotation Download

A TAIR tool useful for downloading Arabidopsis GO annotations for a list of genes.

Search/Browse Gene Ontology Database

The Gene Ontology website, providing tools for searching and browsing gene functional annotation for several organisms. <dtSearch/Browse Plant Ontology Database </dtThe Plant Ontology website, providing tools for searching and browsing plant structure and developmental stages terms.

Submit Functional Annotation to TAIR

Information on how to submit functional information about your genes to TAIR.

FTP Downloads

Links to ftp directories in TAIR containing downloadable files with gene functional annotation data done at TAIR.