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Detailed information about the reference genomes and proteins from PANTHER 14.0 that are included in PhyloGenes can be found at PANTHERDB.
To cite PANTHER 14 , use this reference.
| Scientific Name | Phylogenes Displayed Name | Genome Version | UniProt Reference Version | Total ACTUAL number of protein coding genes (PCG) | Total number of protein coding genes (PCG) in PANTHER families | % of Genes in PANTHER v14 |
|---|---|---|---|---|---|---|
| Amborella trichopoda | A. trichopoda | AMTR1.0 | 2018_04 | 26308 | 15685 | 59.62% |
| Arabidopsis thaliana | A. thaliana | TAIR10.1 | 2018_04 | 27581 | 24368 | 88.35% |
| Brachypodium distachyon | B. distachyon | Brachypodium_distachyon_v3.0 | 2018_04 | 26492 | 23975 | 90.50% |
| Brassica rapa subsp. Pekinensis | Chinese cabbage | Brapa_1.0 | 2018_04 | 39719 | 33737 | 84.94% |
| Chlamydomonas reinhardtii | C. reinhardtii | Chlamydomonas_reinhardtii_v5.5 | 2018_04 | 17608 | 10573 | 60.05% |
| Citrus sinensis | orange | Citrus_sinensis_v1.0 | 2018_04 | 26581 | 21089 | 79.34% |
| Cucumis sativus | cucumber | ASM407v2 | 2018_04 | 22933 | 17927 | 78.17% |
| Erythranthe guttata | E. guttata | Mimgu1_0 | 2018_04 | 26339 | 23042 | 87.48% |
| Glycine max | soybean | Glycine_max_v2.0 | 2018_04 | 56626 | 48302 | 85.30% |
| Gossypium hirsutum | cotton | ASM98774v1 | 2018_04 | 58466 | 52336 | 89.52% |
| Helianthus annuus | sunflower | HanXRQr1.0 | 2018_04 | 49279 | 36322 | 73.71% |
| Hordeum vulgare | barley | IBSC v2 | 2018_04 | 34452 | 24913 | 72.31% |
| Medicago truncatula | M. truncatula | MedtrA17_4.0 | 2018_04 | 48096 | 29883 | 62.13% |
| Musa acuminata | banana | ASM31385v1 | 2018_04 | 35425 | 27552 | 77.78% |
| Nicotiana tabacum | tobacco | Ntab-TN90 | 2018_04 | 59342 | 50517 | 85.13% |
| Oryza sativa | rice | IRGSP-1.0 | 2018_04 | 43569 | 26454 | 60.72% |
| Ostreococcus tauri | O. tauri | 140606 | 2018_04 | 7727 | 5479 | 70.91% |
| Phoenix dactylifera | date palm | DPv01 | 2018_04 | 24557 | 22921 | 93.34% |
| Physcomitrella patens | P. patens | Phypa V3 | 2018_04 | 30837 | 19132 | 62.04% |
| Populus trichocarpa | black cottonwood | Pop_tri_v3 | 2018_04 | 41010 | 34132 | 83.23% |
| Prunus persica | peach | Prunus_persica_NCBIv2 | 2018_04 | 25514 | 21587 | 84.61% |
| Ricinus communis | castor bean | JCVI_RCG_1.1 | 2018_04 | 30207 | 19859 | 65.74% |
| Setaria italica | foxtail millet | Setaria_italica_v2.0 | 2018_04 | 34187 | 25231 | 73.80% |
| Solanum lycopersicum | tomato | SL2.50 | 2018_04 | 33952 | 25861 | 76.17% |
| Sorghum bicolor | sorghum | Sorghum_bicolor_NCBIv3 | 2018_04 | 32590 | 24763 | 75.98% |
| Theobroma cacao | cocoa | Theobroma_cacao_20110822 | 2018_04 | 27935 | 20533 | 73.50% |
| Triticum aestivum | wheat | iwgsc_refseqv1.0 | 2018_04 | 96567 | 84371 | 87.37% |
| Vitis vinifera | grape | 12X | 2018_04 | 29851 | 23720 | 79.46% |
| Zea mays | corn | B73 RefGen_v4 | 2018_04 | 39442 | 32833 | 83.24% |
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